Downloads in the 30 and 7 days to October 10, 2026. Refreshed weekly.
Package Information
No reported malware or high/critical advisories · Details
The current version has no OSV.dev malware reports and no critical or high-severity vulnerabilities.
Package Insights
((week_daily_avg - month_daily_avg) / month_daily_avg) * 100More insights and metrics
Downloads by OS
Python Versions
Top Countries
Weekly Downloads
GitHub Stars
Dependencies
- geopandas
- joblib >=1.3
- matplotlib
- natsort
- networkx
- numba
- numpy
- opencv-python
- pandas
- pyarrow
- rich
- scikit-image
- scikit-learn
- scipy
- seaborn
- shapely
- tqdm
- typer
39 optional dependencies
-
anndata[annotation]extra == "annotation"
-
anndata[all]extra == "all"
-
anndata[anndata]extra == "anndata"
-
celltypist[annotation]extra == "annotation"
-
celltypist[all]extra == "all"
-
combat[batch]extra == "batch"
-
combat[all]extra == "all"
-
coverage[test]extra == "test"
-
decoupler[all]extra == "all"
-
decoupler[decoupler]extra == "decoupler"
-
geopandas[spatial]extra == "spatial"
-
harmonypy[all]extra == "all"
-
harmonypy[batch]extra == "batch"
-
igraph[all]extra == "all"
-
igraph[clustering]extra == "clustering"
-
ipdb[test]extra == "test"
-
leidenalg[clustering]extra == "clustering"
-
leidenalg[all]extra == "all"
-
pointpats[all]extra == "all"
-
pointpats[ripley]extra == "ripley"
-
pydeseq2[deg]extra == "deg"
-
pydeseq2[all]extra == "all"
-
pynndescent[clustering]extra == "clustering"
-
pynndescent[all]extra == "all"
-
pytest[test]extra == "test"
-
ruff[test]extra == "test"
-
scanpy[all]extra == "all"
-
scanpy[anndata]extra == "anndata"
-
scikit-misc[all]extra == "all"
-
scikit-misc[hvg]extra == "hvg"
-
scvi-tools[imputation]extra == "imputation"
-
shapely[spatial]extra == "spatial"
-
statsmodels[batch]extra == "batch"
-
statsmodels[deg]extra == "deg"
-
statsmodels[all]extra == "all"
-
ty[test]extra == "test"
-
umap-learn[all]extra == "all"
-
umap-learn[reduction]extra == "reduction"
-
zarr[test]extra == "test"