PyRank
slowkow

harmonypy

🎼 Integrate multiple high-dimensional datasets with fuzzy k-means and locally linear adjustments.
PyPI GitHub
More links
Download Stats Changelog Issues
Verified repo
Monthly downloads
89.6K
Weekly downloads
25.3K
GitHub stars
289

Downloads in the 30 and 7 days to October 10, 2026. Refreshed weekly.

Package Information

Latest Version
2.1.0
Requires Python
>=3.9
Licence
GPL-3.0-or-later
Last Release
1 week ago
First Release
December 19, 2019
Total Releases
15
Python Versions
3 3.9 3.10 3.11 3.12 3.13 3.14
No reported malware or high/critical advisories · Details

The current version has no OSV.dev malware reports and no critical or high-severity vulnerabilities.

Package Insights

What's this?
Score breakdown - each component scores 0-100, weighted by percentage
Maintenance
80
Popularity
49
Adoption
89
Community
20
Provenance
100
How the maintenance status was determined
Last commit
10 days ago
Monthly downloads
89,629
• Active
Activity within 30 days
Stable
Activity within 31-180 days
Minimal
Activity within 181-365 days, or no activity data
At Risk
No activity for > 365 days, but > 10,000 monthly downloads
Archived
Repository flagged as archived on GitHub
How the popularity category was determined
Monthly downloads
89,629
Stars
289
Stars per 1k downloads
3.22
Industry Standard
> 10,000,000 monthly downloads
Hidden Gem
< 0.5 stars per 1k downloads and > 100,000 monthly downloads
Community Favorite
> 5 stars per 1k downloads
• Rising Star
Balanced ratio of stars to downloads
Unknown
Fewer than 1,000 monthly downloads, or no star data
How download momentum is calculated
Week daily avg
3,620
Month daily avg
2,988
Momentum
+21.2%
((week_daily_avg - month_daily_avg) / month_daily_avg) * 100
More insights and metrics
Python version support tiers
requires_python
>=3.9
Cutting Edge
Minimum supported version is 3.14 or newer
Modern
Minimum supported version is 3.11 to 3.13
• Legacy
Supports 3.10 or older (or Python 2)
Unknown
No requires_python specified or unparseable
License categories
License
GPL-3.0-or-later
Permissive
MIT, Apache, BSD, ISC, Unlicense, CC0, etc.
• Copyleft
GPL, LGPL, AGPL, MPL, EPL, etc.
Proprietary
Commercial, all rights reserved, custom EULAs
Unknown
No license specified, or none of the above match
How the release cadence was determined
Last release
10 days ago
Total releases
15
Releases/year
2.2
Rapid
Last release within 365 days and > 12 releases/year
• Regular
Last release within 365 days
Slow
Last release 366-730 days ago
Stalled
Last release > 730 days ago, or no releases
Unknown
No usable release date available
How contributor risk was determined
Contributors
6
Monthly downloads
89,629
High Load
≤ 2 contributors and ≥ 50,000 monthly downloads
Moderate Load
< 10 contributors and ≥ 500,000 monthly downloads
Low Load
< 25 contributors and ≥ 5,000,000 monthly downloads, or sole maintainer with ≥ 10,000 monthly downloads
• Balanced
Enough contributors for the package's popularity
Unknown
No contributor data available
Engagement
24
 
Issue Burden
0.0
per 1k stars
Discussions
0.0
per 1k stars
Fork Ratio
20.7%
contrib / forks
Stale Release
No
 
PR Velocity
Quiet
 
Not all downloads include detailed metadata. Breakdowns reflect the subset that does.

Downloads by OS

Linux 2.0K
Windows 213
macOS 88

Python Versions

3.11
32.9% 754
3.10
30.1% 690
3.12
23.3% 534
3.13
8.0% 184
3.14
5.8% 132

Top Countries

1. US US
1.9K
2. SG SG
254
3. CN CN
168
4. HK HK
102
5. DE DE
83
6. JP JP
32
7. GB GB
21
8. FR FR
20
9. TW TW
18
10. CA CA
12

Weekly Downloads

GitHub Stars

Dependencies

1
3 optional dependencies
  • pandas[test]
    extra == "test"
  • pytest>=8.4.2[test]
    extra == "test"
  • scipy[test]
    extra == "test"

Used By

50
View all 50 dependents

Repository details

Forks
29
Issues
0
Last Commit
1 week ago
Contributors
6
Open PRs
0
Archived
No

Data and sources

Tracking Since
September 26, 2026
Data Updated
October 11, 2026
Data Freshness
Fresh
Keywords
harmony batch-correction integration single-cell bioinformatics
Sources and methodology