Spatial Analysis Python Packages

apache-sedona

A cluster computing framework for processing large-scale geospatial data

osmnx

Download, model, analyze, and visualize street networks and other geospatial features from OpenStreetMap.

xarray-spatial

Spatial analysis algorithms for xarray implemented in numba

spreg

Spatial econometric regression in Python

segregation

Segregation Measurement, Inferential Statistics, and Decomposition Analysis

cityseer

Computational tools for urban analysis

spopt

Spatial Optimization

pykrige

Kriging Toolkit for Python

squidpy

Spatial Single Cell Analysis in Python

routingpy

🌎 Python library to access all public routing, isochrones and matrix APIs in a consistent manner.

sekejap

A graph-first, embedded multi-model database engine

freud-analysis

Powerful, efficient particle trajectory analysis in scientific Python.

napari-spatialdata

Interactive visualization of spatial omics data

scimap

Spatial Single-Cell Analysis Toolkit

torch-geometric-temporal

PyTorch Geometric Temporal: Spatiotemporal Signal Processing with Neural Machine Learning Models (CIKM 2021)

geospark

A cluster computing framework for processing large-scale geospatial data

ouroboros-gis

No description available

geoplot

High-level geospatial data visualization library for Python.

forestatrisk

📦🐍 Python package to model and forecast the risk of deforestation

geolens

Self-hosted geospatial data catalog with semantic search (pgvector), OGC/STAC APIs, and map builder. Built on FastAPI, PostGIS, React, and MapLibre.

geolens-cli

Self-hosted geospatial data catalog with semantic search (pgvector), OGC/STAC APIs, and map builder. Built on FastAPI, PostGIS, React, and MapLibre.

city2graph

Transform geospatial relations into graphs for Graph Neural Networks and network analysis

fastgeotoolkit

Performant JS library for GPS route density mapping

chatspatial

MCP server for spatial transcriptomics analysis through natural language interfaces.