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- No releases in 93 days despite active commits
((week_daily_avg - month_daily_avg) / month_daily_avg) * 100Weekly Downloads
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Dependencies
- aiohttp >=3.8.1
- anndata >=0.9
- cycler >=0.11
- dask >=2021.2
- dask-image >=0.5
- docrep >=0.3.1
- fast-array-utils
- fsspec >=2021.11
- imagecodecs <2026,>=2025.8.2
- matplotlib >=3.3
- matplotlib-scalebar >=0.8
- networkx >=2.6
- numba >=0.56.4
- numpy >=1.23
- omnipath >=1.0.7
- pandas >=2.1
- pillow >=8
- pooch >=1.6
- pyyaml >=6
- scanpy >=1.9.3
- scikit-image >=0.25
- scikit-learn >=0.24
- spatialdata >=0.7.1
- spatialdata-plot
- statsmodels >=0.12
- tifffile !=2022.4.22
- tqdm >=4.50.2
- validators >=0.18.2
- xarray >=2024.10
- zarr >=3
31 optional dependencies
- coverage[test]
- docutils[docs]
- hatch[dev]
- ipykernel[dev]
- ipython[docs]
- ipywidgets[docs]
- ipywidgets[dev]
- jupyterlab[dev]
- jupytext[dev]
- leidenalg[leiden]
- myst-nb[docs]
- nbsphinx[docs]
- notebook[dev]
- pre-commit[dev]
- pytest[test]
- pytest-cov[test]
- pytest-mock[test]
- pytest-timeout[test]
- pytest-xdist[test]
- ruff[dev]
- scanpy[test]
- spatialleiden[leiden]
- sphinx[docs]
- sphinx-autodoc-annotation[docs]
- sphinx-autodoc-typehints[docs]
- sphinx-copybutton[docs]
- sphinx-design[docs]
- sphinx-rtd-theme[docs]
- sphinx-tabs[docs]
- sphinxcontrib-bibtex[docs]
- sphinxcontrib-spelling[docs]
Used By
- spamv
- celldega
- chatspatial
- pseudovisium
- revise-svc
- enrichmap
- cellcharter
- sccellfie
- stereopy
- b-hit
- spatialzoomerpy
- milwrm
- popari
- st-graphpca
- scmalignantfinder
- spatialzoomer
- spatialcheckpoint
- spatialcore
- quest-niche
- geome
- segtraq
- imc-analysis
- flowsig
- mievformer
- deeptalk-st
- spottedpy
- spotiphy
- entrain
- finest
- space-srt
- spahdmap
- graphcompass
- spatialsnake
- interscale
- metachat
- napari-prism
- deepfusenmf
- palmettobug
- stereosegger
- glue-genes
- euclid-msi
- xclone
- goatpy
- stereosite
- ncem
- sthd
- stereoutils
- baits
- aestetik
- steamboat-bio