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Image Analysis Python Packages

Python packages with the GitHub topic image-analysis. Sorted by relevance, with stars and monthly downloads.
SimpleITK
simpleitk

SimpleITK: a layer built on top of the Insight Toolkit (ITK), intended to simplify and facilitate ITK's use in rapid prototyping, education and interpreted languages.

710K 1K 227
InsightSoftwareConsortium
itk-filtering

Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.

134K 2K 731
InsightSoftwareConsortium
itk-core

Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.

134K 2K 731
InsightSoftwareConsortium
itk-numerics

Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.

133K 2K 731
InsightSoftwareConsortium
itk

Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.

130K 2K 731
InsightSoftwareConsortium
itk-io

Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.

127K 2K 731
InsightSoftwareConsortium
itk-segmentation

Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.

123K 2K 731
InsightSoftwareConsortium
itk-registration

Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.

123K 2K 731
scverse
squidpy

Spatial Single Cell Analysis in Python

56K 569 113
TissueImageAnalytics
tiatoolbox

Computational Pathology Toolbox developed by TIA Centre, University of Warwick.

35K 527 107
rapidsai
cucim

cuCIM - RAPIDS GPU-accelerated image processing library

27K 457 81
seung-lab
fpzip

Cython bindings for fpzip, a floating point image compression algorithm.

17K 36 5
abraia
abraia

Abraia computer vision SDK for edge applications

17K 9 0
InsightSoftwareConsortium
itkwidgets

An elegant Python interface for visualization on the web platform to interactively generate insights into multidimensional images, point sets, and geometry.

16K 622 82
rapidsai
cucim-cu12

cuCIM - RAPIDS GPU-accelerated image processing library

15K 457 81
PMEAL
porespy

A set of tools for characterizing and analyzing 3D images of porous materials

12K 405 115
cleanlab
cleanvision

Automatically find issues in image datasets and practice data-centric computer vision.

10K 1K 82
labsyspharm
scimap

Spatial Single-Cell Analysis Toolkit

9K 111 36
clEsperanto
pyclesperanto

GPU-accelerated Image Processing library for Python

9K 57 8
visualdatabase
fastdup

fastdup is a powerful, free tool designed to rapidly generate valuable insights from image and video datasets. It helps enhance the quality of both images and labels, while significantly reducing data operation costs, all with unmatched scalability.

7K 2K 87
phasorpy
phasorpy

An open-source Python library for the analysis of luminescence lifetime and hyperspectral images using the phasor approach.

7K 37 15
DIPlib
diplib

Quantitative Image Analysis in C++, MATLAB and Python

7K 254 54
brainglobe
cellfinder

Automated 3D cell detection in very large images

6K 227 78
arizawan
vidlizer

Point it at a video, image, or PDF — get structured JSON. Runs local (Ollama, LM Studio, oMLX) or cloud (OpenRouter). CLI + MCP server for Claude Code, Cursor, and Claude Desktop.

6K 1 1
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