PyRank
cogent3

cogent3

Comparative Genomics Toolkit 3
PyPI GitHub
More links
Download Stats Bug Tracker Changelog
Verified repo
Monthly downloads
10.6K
Weekly downloads
2.7K
GitHub stars
139

Downloads in the 30 and 7 days to October 10, 2026. Refreshed weekly.

Package Information

Latest Version
2026.10.15
Requires Python
<3.15,>=3.11
Licence
BSD-3-Clause
Last Release
Yesterday
Author
Gavin Huttley
First Release
November 15, 2019
Total Releases
88
Python Versions
3.11 3.12 3.13 3.14
No reported malware or high/critical advisories · Details

The current version has no OSV.dev malware reports and no critical or high-severity vulnerabilities.

Package Insights

What's this?
Score breakdown - each component scores 0-100, weighted by percentage
Maintenance
90
Popularity
48
Adoption
70
Community
80
Provenance
100
How the maintenance status was determined
Last commit
14 days ago
Monthly downloads
10,552
• Active
Activity within 30 days
Stable
Activity within 31-180 days
Minimal
Activity within 181-365 days, or no activity data
At Risk
No activity for > 365 days, but > 10,000 monthly downloads
Archived
Repository flagged as archived on GitHub
How the popularity category was determined
Monthly downloads
10,552
Stars
139
Stars per 1k downloads
13.17
Industry Standard
> 10,000,000 monthly downloads
Hidden Gem
< 0.5 stars per 1k downloads and > 100,000 monthly downloads
• Community Favorite
> 5 stars per 1k downloads
Rising Star
Balanced ratio of stars to downloads
Unknown
Fewer than 1,000 monthly downloads, or no star data
How download momentum is calculated
Week daily avg
392
Month daily avg
352
Momentum
+11.4%
((week_daily_avg - month_daily_avg) / month_daily_avg) * 100
More insights and metrics
Python version support tiers
requires_python
<3.15,>=3.11
Cutting Edge
Minimum supported version is 3.14 or newer
• Modern
Minimum supported version is 3.11 to 3.13
Legacy
Supports 3.10 or older (or Python 2)
Unknown
No requires_python specified or unparseable
License categories
License
BSD-3-Clause
• Permissive
MIT, Apache, BSD, ISC, Unlicense, CC0, etc.
Copyleft
GPL, LGPL, AGPL, MPL, EPL, etc.
Proprietary
Commercial, all rights reserved, custom EULAs
Unknown
No license specified, or none of the above match
How the release cadence was determined
Last release
1 days ago
Total releases
88
Releases/year
12.7
• Rapid
Last release within 365 days and > 12 releases/year
Regular
Last release within 365 days
Slow
Last release 366-730 days ago
Stalled
Last release > 730 days ago, or no releases
Unknown
No usable release date available
How contributor risk was determined
Contributors
60
Monthly downloads
10,552
High Load
≤ 2 contributors and ≥ 50,000 monthly downloads
Moderate Load
< 10 contributors and ≥ 500,000 monthly downloads
Low Load
< 25 contributors and ≥ 5,000,000 monthly downloads, or sole maintainer with ≥ 10,000 monthly downloads
• Balanced
Enough contributors for the package's popularity
Unknown
No contributor data available
Engagement
75
 
Issue Burden
194.2
per 1k stars
Discussions
158.3
per 1k stars
Fork Ratio
88.2%
contrib / forks
Stale Release
No
 
PR Velocity
Quiet
 
Not all downloads include detailed metadata. Breakdowns reflect the subset that does.

Downloads by OS

Linux 47
Windows 5
macOS 2

Python Versions

3.12
49.1% 26
3.10
37.7% 20
3.13
5.7% 3
3.14
5.7% 3
2.7
1.9% 1

Top Countries

1. KR KR
237
2. US US
125
3. RU RU
18
4. CN CN
10
5. HK HK
8
6. DE DE
5
7. IE IE
4
8. GB GB
3
9. SG SG
3
10. AT AT
2

Weekly Downloads

GitHub Stars

Dependencies

10
10 optional dependencies

Used By

22
View all 22 dependents

Data and sources

Tracking Since
September 26, 2026
Data Updated
October 11, 2026
Data Freshness
Fresh
Keywords
biology genomics statistics phylogeny evolution bioinformatics
Sources and methodology