Downloads in the 30 and 7 days to October 10, 2026. Refreshed weekly.
Package Information
No reported malware or high/critical advisories · Details
The current version has no OSV.dev malware reports and no critical or high-severity vulnerabilities.
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Dependencies
- cutadapt >=5.2
- jinja2 >=3.1.5
- loguru >=0.7.3
- matplotlib >=3.10.8
- multiqc >=1.33
- numba >=0.57.0
- pandas >=2.0
- pydantic >=2.12.0
- pysam >=0.23.3
- scipy >=1.15.0
- typer >=0.21.1
5 optional dependencies
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mypy>=1.19.1[dev]extra == "dev"
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pre-commit>=4.5.1[dev]extra == "dev"
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pytest>=9.0.2[dev]extra == "dev"
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pytest-cov>=7.0.0[dev]extra == "dev"
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ruff>=0.14.13[dev]extra == "dev"