PyRank
  • Search
  • PyPI
  • GitHub
  • Insights
  • Compare
  • Advisories
  • Ecosystem
  • About

Amplicon Sequencing Python Packages

Python packages with the GitHub topic amplicon-sequencing. Sorted by monthly downloads, with stars and forks.
RIVM-bioinformatics
ampligone

A tool in order to accurately remove primer sequences from NGS reads in an amplicon experiment

738 20 1
sfilges
umierrorcorrect2

Pipeline for UMI error correction and variant calling from amplicon sequencing data

286 0 0
kohyamat
massgenotyping

Python package for microsatellite genotyping from highly multiplexed amplicon sequencing data

145 8 1
joshuaowalker
pyitsx

Fast ITS region detection and extraction for Python, powered by in-process HMM search via pyhmmer

82 0 0
    • Original data from PyPI, GitHub, and OSV; downloads served through ClickHouse
    • Sources & methodology