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Amplicon Sequencing Python Packages

Python packages with the GitHub topic amplicon-sequencing. Sorted by relevance, with stars and monthly downloads.
RIVM-bioinformatics
ampligone

AmpliGone is a tool which accurately removes primer sequences from FastQ NGS reads in an amplicon sequencing experiment

768 20 1
sfilges
umierrorcorrect2

Pipeline for UMI error correction and variant calling from amplicon sequencing data

550 0 0
joshuaowalker
pyitsx

Fast ITS region detection and extraction using in-process HMM search

426 0 0
kohyamat
massgenotyping

Python package for microsatellite genotyping from amplicon sequencing data

235 8 1
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