Downloads in the 30 and 7 days to October 10, 2026. Refreshed weekly.
Package Information
No reported malware or high/critical advisories · Details
The current version has no OSV.dev malware reports and no critical or high-severity vulnerabilities.
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Dependencies
- anndata >=0.11.0
- click <9,>=8.0.0
- click-default-group <2,>=1.2.0
- flox <0.11.0,>=0.10.0
- h5py <4,>=3.0.0
- numpy <3,>=2.0.0
- pandas <4,>=2.2.0
- pybiomart ==0.2.0
- tqdm <5,>=4.0.0
- xarray >=2024.0.0
36 optional dependencies
-
bandit[dev]extra == "dev"
-
biocframe[biocpy]extra == "biocpy"
-
biocframe[dev]extra == "dev"
-
certifi[dev]extra == "dev"
-
coverage[dev]extra == "dev"
-
decoupler[dev]extra == "dev"
-
dolomite[dev]extra == "dev"
-
dolomite[biocpy]extra == "biocpy"
-
dolomite-se[biocpy]extra == "biocpy"
-
dolomite-se[dev]extra == "dev"
-
flit[dev]extra == "dev"
-
furo[dev]extra == "dev"
-
ipykernel[dev]extra == "dev"
-
jupyter-client[dev]extra == "dev"
-
jupyter-core[dev]extra == "dev"
-
mypy==1.15.0[dev]extra == "dev"
-
myst-parser[dev]extra == "dev"
-
nbsphinx[dev]extra == "dev"
-
pandas-stubs[dev]extra == "dev"
-
pandoc[dev]extra == "dev"
-
pre-commit[dev]extra == "dev"
-
pyarrow[dev]extra == "dev"
-
pyarrow[pyarrow]extra == "pyarrow"
-
pydeseq2[dev]extra == "dev"
-
pypath-omnipath[dev]extra == "dev"
-
pytest[dev]extra == "dev"
-
ruff==0.13.2[dev]extra == "dev"
-
sphinx[dev]extra == "dev"
-
sphinx-autoapi[dev]extra == "dev"
-
sphinx-autodoc-typehints[dev]extra == "dev"
-
sphinx-copybutton[dev]extra == "dev"
-
sphinx-design[dev]extra == "dev"
-
sphinx-rtd-theme[dev]extra == "dev"
-
summarizedexperiment[dev]extra == "dev"
-
summarizedexperiment[biocpy]extra == "biocpy"
-
types-tqdm[dev]extra == "dev"