Downloads in the 30 and 7 days to October 10, 2026. Refreshed weekly.
Package Information
No reported malware or high/critical advisories · Details
The current version has no OSV.dev malware reports and no critical or high-severity vulnerabilities.
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Dependencies
- adjusttext >=0.8
- aiohttp >=3.8.5
- attrs >=23.1.0
- beartype
- bibtexparser <2,>=1.4
- biocypher ==0.15.2
- biopython >=1.81
- cliff >=4.5.0
- cobra >=0.29.1
- deepdiff >=7.0.1
- fastapi >=0.115
- fastjsonschema >=2.21.1
- filelock >=3.20.1
- geomloss >=0.2.6
- geoparse >=2.0.4
- gffutils >=0.12
- goatools >=1.3.1
- h5py >=3.9.0
- hydra-core >=1.3.2
- hypernetx >=2.3.10
- intermine >=1.13.0
- lightning >=2.4.0
- lmdb >=1.4.1
- matplotlib >=3.9
- matplotlib-venn >=1.1.2
- memory-profiler >=0.61.0
- neo4j <5.0,>=4.4.11
- networkx >=3.2.1
- nxontology >=0.5.0
- openpyxl >=3.1.2
- owlready2 >=0.45
- pandas >=2.1.1
- pandas-stubs >=2.0.3.230814
- pip-tools >=7.1.0
- plotly >=5.18.0
- pre-commit >=3.3.3
- pronto >=2.5.4
- pyarrow >=15.0.0
- pydantic >=2.8.2
- pydot >=1.4.2
- pyreadr >=0.4.9
- python-dotenv >=1.0.0
- python-semantic-release >=9.0.3
- pyzotero >=1.5.0
- rdata >=1.1.0
- rdkit >=2026.3.6
- scikit-image >=0.22
- scikit-learn >=1.2.2
- scipy >=1.11.4
- seaborn >=0.12.2
- sentencepiece >=0.1.99
- snakeviz >=2.2.0
- sortedcontainers >=2.4.0
- torch >=2.11.0
- torch-geometric >=2.8.0
- torchmetrics >=1.2.1
- transformers >=4.55.4
- twine >=4.0.2
- types-requests >=2.31.0.2
- types-tqdm >=4.65.0.2
- umap-learn >=0.5.3
- unidecode >=1.3.0
- uvicorn >=0.30
- wandb >=0.22.0
- wandb-osh >=1.2.2
- xlrd >=2.0.1
5 optional dependencies
-
mypy[dev]extra == "dev"
-
pip-tools[dev]extra == "dev"
-
pytest[dev]extra == "dev"
-
ruff[dev]extra == "dev"
-
semantic-release[dev]extra == "dev"