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Provenance Tracking Python Packages

Python packages with the GitHub topic provenance-tracking. Sorted by monthly downloads, with stars and forks.
aiidateam
aiida-workgraph

Efficiently design and manage flexible workflows with AiiDA, featuring an interactive GUI, checkpoints, provenance tracking, and remote execution capabilities.

6K 32 16
parashardhapola
scarf

Memory-efficient single-cell analysis in Python. Stream RNA, ATAC, CITE-seq and multi-omics from local or remote Zarr stores, from laptop to atlas scale, with reusable fingerprinted results.

5K 126 18
Zhonghao1995
aiswmm

Agentic SWMM is an automated, auditable, and memory-informed framework for reproducible stormwater modelling, integrating QGIS and EPA SWMM through the aiswmm runtime, reusable Skills, and MCP interfaces, with QA verification, provenance tracking, calibration support, and Codex, Hermes, Claude code as well as OpenClaw compatibility

2K 30 15
Kisyntra
agent-sudo-mcp

Authorization, delegation, provenance, and verifiable-audit engine for AI agents. MCP adapter published.

1K 5 3
visdesignlab
persist-ext

Persist is a JupyterLab extension to enable persistent interactive visualizations in JupyterLab notebooks.

610 50 5
NygenAnalytics
cytearc

Fast, out-of-core single-cell analysis in Python for RNA, ATAC, protein, and multi-omic data, scaling to 100M+ cells. Mount remote datasets, work within a memory budget, and trace every result through built-in provenance.

598 3 2
fariello
pubrun

Stupidly simple Python execution provenance for reproducible research

321 0 0
PierreSenellart
provsql-studio

Adding support for provenance and uncertainty management to PostgreSQL databases

294 75 17
sensein
provsense

ProvSense is a Python library for managing knowledge graph provenance. It enables efficient comparison of files, tracking changes, and enforcing provenance rules to ensure data integrity and traceability. Ideal for researchers and developers, ProvSense promotes transparency and accountability in data-driven workflows.

228 0 0
kirangadhave
interactivede

Persist is a JupyterLab extension to enable persistent interactive visualizations in JupyterLab notebooks.

179 50 5
kren-ai-lab
silkroute

Framework for Reproducible Biomolecular Data Acquisition and Dataset Construction

162 1 0
alcrene
smttask

Maintain an electronic lab book for computational research

127 3 1
Zhonghao1995
agentic-swmm-workflow

Agentic SWMM is an automated, auditable, and memory-informed framework for reproducible stormwater modelling, integrating QGIS and EPA SWMM through the aiswmm runtime, reusable Skills, and MCP interfaces, with QA verification, provenance tracking, calibration support, and Codex, Hermes, Claude code as well as OpenClaw compatibility

113 30 15
    • Original data from PyPI, GitHub, and OSV; downloads served through ClickHouse
    • Sources & methodology