PyRank
  • Insights
  • PyPI
  • GitHub
  • Search
  • Compare
  • Advisories
  • Ecosystem
  • About

Peptide Identification Python Packages

Python packages with the GitHub topic peptide-identification. Sorted by relevance, with stars and monthly downloads.
compomics
ms2pip

MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.

6K 49 19
compomics
psm-utils

Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python

4K 31 10
MannLabs
alphadia

A novel proteomics search engine for DIA data based on end-to-end transfer learning.

2K 108 11
compomics
ms2rescore

Modular and user-friendly platform for AI-assisted rescoring of peptide identifications.

1K 64 21
pgarrett-scripps
peptacular

A Python package for peptide sequence analysis built around ProForma 2.1 notation. Calculate masses, generate fragments, predict isotopic patterns, and more.

833 17 2
lemieux-lab
pepid

Pepid: a Highly Modifiable, Bioinformatics-Oriented Peptide Search Engine

138 2 1
    • Data from PyPI, GitHub, ClickHouse, and BigQuery