Parameter Estimation Python Packages

casadi

CasADi is a symbolic framework for numeric optimization implementing automatic differentiation in forward and reverse modes on sparse matrix-valued computational graphs. It supports self-contained C-code generation and interfaces state-of-the-art codes such as SUNDIALS, IPOPT etc. It can be used from C++, Python or Matlab/Octave.

1.2M 2K 451

sbi

sbi is a Python package for simulation-based inference, designed to meet the needs of both researchers and practitioners. Whether you need fine-grained control or an easy-to-use interface, sbi has you covered.

19K 843 243

pints

Probabilistic Inference on Noisy Time Series

17K 241 34

petab

Python package for working with PEtab files

9K 17 9

amici

High-performance sensitivity analysis for large ordinary differential equation models

6K 140 33

symbolic-regression-toolkit

Symbolic Regression/Equation Discovery Toolkit

2K 10 1

chekipeuq

This is the CheKiPEUQ package which stands for Chemical Kinetics Parameter Estimation and Uncertainty Quantification. See https://github.com/AdityaSavara/CheKiPEUQ for more information.

2K 14 5

pypesto

python Parameter EStimation TOolbox

2K 275 48

casadi-gil-comp

2K 2K 451

biomass

A Python Framework for Modeling and Analysis of Signaling Systems

1K 30 13

parametrix

🪄 Flax-like computed parameters for bare JAX (and Equinox)

1K 0 0

apexmf

python modules for APEX-MODFLOW-RT3D-Salt (AMRS) model parameter estimation and uncertainty analysis

1K 1 2

pycotools

A python toolbox for COPASI

908 6 4

petab-gui

A graphical PEtab editor

734 5 1

psweep

Loop like a pro, make parameter studies fun.

658 16 2

peuqse

This is the PEUQSE package which stands for Parameter Estimation and Uncertainty Quantification for Science and Engineering. See https://github.com/AdityaSavara/PEUQSE for more information.

638 14 5

pycotools3

A Python toolbox for COPASI

607 13 3

lim-sample

Package for the SAMPLE method

601 8 0

madys

Manifold Age Determination for Young Stars

586 10 2

swyft

A system for scientific simulation-based inference at scale.

573 172 19

torchmeter

TorchMeter⏲️: Your all-in-one tool for Pytorch model analysis, measuring Params, FLOPs/MACs(aka. MACC or MADD), Memory cost, Inference time and Throughput! ! 🚀

529 6 0

pvfit5

Estimation of the five parameters of the PV single-diode model from datasheet data at STC

502 0 0

chi-drm

Chi is an open source Python package which is designed for PKPD modelling and model-informed precision dosing (MIPD).

477 17 7

welltestpy

A python-package for handling well based field campaigns.

401 37 7