Genome Editing Python Packages

crisprzip

A kinetic model of CRISPR-Cas target recognition.

crisprhawk

Variant- and Haplotype-aware CRISPR guide design toolkit

pen-assemble

Programmable Enzyme Networks: automated pipeline for IS110-family bridge recombinase design and scoring

pen-compare

Hierarchical Certification Framework for Non-Destructive Genome Editors

crispr-cats

Comparing Cas Activities by Target Superimposition - find genomic regions nearby two distinct sequences of interest.

pen-score

Physics-informed scoring function for non-destructive genome-writing potential