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Batch Correction Python Packages

Python packages with the GitHub topic batch-correction. Sorted by relevance, with stars and monthly downloads.
sdomanskyi
digitalcellsorter

Toolkit for analysis and identification of cell types from heterogeneous single cell RNA-seq data

3K 24 10
theislab
scarches

Reference mapping for single-cell genomics

3K 404 70
calvinmccarter
condo

Confounded domain adaptation

347 6 1
dpeerlab
harmonyts

Harmony is a unified framework for data visualization, analysis and interpretation of scRNA-seq data measured across discrete time points

210 54 15
Multiomics-Analytics-Group
abaco

Batch Effect Correction framework for metagenomic data

162 3 0
edwinv87
feats

A Python tool for performing downstream analysis on Single-Cell RNA-seq datasets

153 3 3
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