Downloads in the 30 and 7 days to October 10, 2026. Refreshed weekly.
Package Information
No reported malware or high/critical advisories · Details
The current version has no OSV.dev malware reports and no critical or high-severity vulnerabilities.
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Dependencies
- anndata >=0.8
- ehrapy
- gudhi
- matplotlib >=3.6
- numpy >=1.23
- opentsne >=0.6
- pandas >=1.5
- plottable
- scipy >=1.10
- seaborn >=0.12
37 optional dependencies
-
coverage[test]extra == "test"
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cuml[gloscope-py-gpu]extra == "gloscope-py-gpu"
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cupy[gloscope-py-gpu]extra == "gloscope-py-gpu"
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diffusionemd[diffusionemd]extra == "diffusionemd"
-
docutils!=0.18.*,!=0.19.*,>=0.8[doc]extra == "doc"
-
helical>=1.8.3[helical]extra == "helical"
-
hydra-core>=1.3[pascient]extra == "pascient"
-
ipykernel[doc]extra == "doc"
-
ipython[doc]extra == "doc"
-
lightning[pascient]extra == "pascient"
-
mixmil>=0.1.2[mixmil]extra == "mixmil"
-
myst-nb>=1.1[doc]extra == "doc"
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nbsphinx[doc]extra == "doc"
-
pandas[doc]extra == "doc"
-
pertpy>=1.0.5[de]extra == "de"
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pertpy>=1.0.5[milo-edger]extra == "milo-edger"
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phate>=1.0.11[diffusionemd]extra == "diffusionemd"
-
pilotpy[pilot]extra == "pilot"
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pre-commit[dev]extra == "dev"
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pynndescent[gloscope-py-cpu]extra == "gloscope-py-cpu"
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pytest[test]extra == "test"
-
pytest-cov[test]extra == "test"
-
s3fs[pascient]extra == "pascient"
-
scarches>=0.5.1[scpoli]extra == "scpoli"
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scvi-tools>=1.2[mrvi]extra == "mrvi"
-
setuptools[doc]extra == "doc"
-
sphinx>=8.1[doc]extra == "doc"
-
sphinx-autodoc-typehints[doc]extra == "doc"
-
sphinx-book-theme>=1[doc]extra == "doc"
-
sphinx-copybutton[doc]extra == "doc"
-
sphinx-design[doc]extra == "doc"
-
sphinx-tabs[doc]extra == "doc"
-
sphinxcontrib-bibtex>=1[doc]extra == "doc"
-
sphinxext-opengraph[doc]extra == "doc"
-
torch>=1.13[mrvi]extra == "mrvi"
-
twine>=4.0.2[dev]extra == "dev"
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wassersteintsne>=1.1[wassersteintsne]extra == "wassersteintsne"