Downloads in the 30 and 7 days to October 10, 2026. Refreshed weekly.
Package Information
No reported malware or high/critical advisories · Details
The current version has no OSV.dev malware reports and no critical or high-severity vulnerabilities.
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((week_daily_avg - month_daily_avg) / month_daily_avg) * 100More insights and metrics
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Dependencies
- biopython <=1.80
- checkv
- cooler
- hicstuff
- looseversion
- micomplete
- networkx
- numpy
- pairtools
- pandas
- pyfastx
- pypairix
- pysam
- scikit-learn
- scipy
- seaborn
56 optional dependencies
-
autodoc[dev]extra == "dev"
-
autodoc[docs]extra == "docs"
-
autodocsumm[docs]extra == "docs"
-
autodocsumm[dev]extra == "dev"
-
black[dev]extra == "dev"
-
codecov[dev]extra == "dev"
-
codecov[test]extra == "test"
-
coverage[test]extra == "test"
-
coverage[dev]extra == "dev"
-
furo[docs]extra == "docs"
-
furo[dev]extra == "dev"
-
hatch[dev]extra == "dev"
-
hatch-build-scripts[dev]extra == "dev"
-
hatchling[dev]extra == "dev"
-
ipython[dev]extra == "dev"
-
isort[dev]extra == "dev"
-
isort[test]extra == "test"
-
lxml[docs]extra == "docs"
-
lxml[dev]extra == "dev"
-
m2r[docs]extra == "docs"
-
m2r[dev]extra == "dev"
-
mypy[dev]extra == "dev"
-
myst-parser[dev]extra == "dev"
-
myst-parser[docs]extra == "docs"
-
nbsphinx[dev]extra == "dev"
-
nbsphinx[docs]extra == "docs"
-
pre-commit[dev]extra == "dev"
-
pydata-sphinx-theme[docs]extra == "docs"
-
pydata-sphinx-theme[dev]extra == "dev"
-
pylint[test]extra == "test"
-
pylint[dev]extra == "dev"
-
pytest[test]extra == "test"
-
pytest[dev]extra == "dev"
-
pytest-cov[test]extra == "test"
-
pytest-cov[dev]extra == "dev"
-
pytest-order[test]extra == "test"
-
pytest-order[dev]extra == "dev"
-
pytest-pylint[test]extra == "test"
-
pytest-pylint[dev]extra == "dev"
-
recommonmark[docs]extra == "docs"
-
recommonmark[dev]extra == "dev"
-
ruff[test]extra == "test"
-
ruff[dev]extra == "dev"
-
sphinx>=1.6[dev]extra == "dev"
-
sphinx>=1.6[docs]extra == "docs"
-
sphinx-autoapi[dev]extra == "dev"
-
sphinx-autoapi[docs]extra == "docs"
-
sphinx-autobuild[dev]extra == "dev"
-
sphinx-autobuild[docs]extra == "docs"
-
sphinx-click[dev]extra == "dev"
-
sphinx-click[docs]extra == "docs"
-
sphinx-rtd-theme[dev]extra == "dev"
-
sphinx-rtd-theme[docs]extra == "docs"
-
sphinxcontrib-napoleon[dev]extra == "dev"
-
sphinxcontrib-napoleon[docs]extra == "docs"
-
twine[dev]extra == "dev"