Downloads in the 30 and 7 days to October 10, 2026. Refreshed weekly.
Package Information
No reported malware or high/critical advisories · Details
The current version has no OSV.dev malware reports and no critical or high-severity vulnerabilities.
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Dependencies
- aiodns
- aiofiles
-
aiohttp
<=3.8.6
python_version < "3.12"
- async-lru
- click >=6.0
- cryptography
- h2
- httpcore
- httpx >=0.23.0
- jsonschema <5,>=4.0
- nest-asyncio
- pyyaml >=5.0
- requests
- rich >=13.0.0
-
synchronicity
>=0.5.0
python_version >= "3.9"
-
typing-extensions
python_version < "3.9"
- websockets >=11.0
20 optional dependencies
-
biopython>=1.78[pipeline]extra == "pipeline"
-
biotite>=0.34.0[pipeline]extra == "pipeline"
-
duckdb<2,>=0.9.0[seqframe]extra == "seqframe"
-
duckdb<2,>=0.9.0[pipeline]extra == "pipeline"
-
jmespath>=1.0.0[pipeline]extra == "pipeline"
-
jupyterlab<5,>=4.0.0[notebook]extra == "notebook"
-
jupyterlab-biolm>=1.4.1[notebook]extra == "notebook"
-
lltp>=0.1.0a1[lltp]extra == "lltp"
-
matplotlib>=3.3.0[pipeline]extra == "pipeline"
-
mlflow>=2.0[mlflow]extra == "mlflow"
-
numpy<3,>=1.20[pipeline]extra == "pipeline"
-
pandas<3,>=1.3.0[pipeline]extra == "pipeline"
-
pandas<3,>=1.3.0[seqframe]extra == "seqframe"
-
pyarrow>=10.0.0[pipeline]extra == "pipeline"
-
pyarrow>=10.0.0[seqframe]extra == "seqframe"
-
scikit-learn>=1.0[pipeline]extra == "pipeline"
-
scipy>=1.7.0[pipeline]extra == "pipeline"
-
seaborn>=0.11.0[pipeline]extra == "pipeline"
-
tqdm>=4.60.0[pipeline]extra == "pipeline"
-
umap-learn>=0.5.0[pipeline]extra == "pipeline"