Zenodo Python Packages

cffconvert

Command line program to validate and convert CITATION.cff files.

46K 143 34

data-aggregator-mcp

Unified research-data acquisition MCP — search & fetch datasets across Zenodo, DataCite, NCBI omics (GEO/SRA/BioProject), and literature (PubMed/OpenAIRE) behind one normalized model.

32K 4 0

ror-downloader

Automate downloading and parsing the latest version of the Research Organization Registry (ROR)

5K 0 0

discretisedfield

Python package for the analysis and visualisation of finite-difference fields.

2K 19 15

pyzenodo3

Simple, clean pure Python 3 Zenodo API (upload, download).

2K 40 5

micromagneticmodel

Python-based domain-specific language for computational magnetism.

2K 13 9

ubermagutil

Utility package used across Ubermag.

2K 5 3

ubermagtable

Python package for manipulating tabular data.

2K 7 3

scitex-dataset

Multi-domain scientific dataset fetcher (neuroscience, biology, medical)

2K 1 0

oommfc

OOMMF calculator.

1K 55 19

micromagnetictests

Testing package for computational magnetism tools.

1K 1 2

micromagneticdata

Python package for the analysis of micromagnetic data.

1K 4 3

templatepy

Template repository for best-practice Python packages

1K 6 0

research-helpers

Python utilities for code-intensive research projects and the papers they produce: generated LaTeX tables and figures with drift detection, shared matplotlib styling, arXiv and Zenodo packaging, structured logging, and parameter sweeps for SLURM job arrays.

806 2 1

ubermag

Meta package for the Ubermag project.

691 46 12

sawsim

SawSim: open-source piezoelectric FEM for SAW resonator unit cells. Python package sawsim (Q9 / Hex27, PML, Bloch periodicity, verified against a reference FEM solution); MATLAB v0.x retained.

682 3 0

mcp-zenodo

Zenodo MCP server — tool-based LLM integration with Zenodo (open-access research repository) via the Model Context Protocol (MCP)

491 6 0

onecite

📚 Only Cite what you can verify

476 67 8

fairspec

Fairspec TypeScript is a fast data management framework built on top of the Fairspec standard and Polars DataFrames

378 1 1

openscm-zenodo

Command-line tool for uploading to zenodo

339 1 0

fairspec-terminal

Fairspec TypeScript is a fast data management framework built on top of the Fairspec standard and Polars DataFrames

331 1 1

fairspec-metadata

Fairspec TypeScript is a fast data management framework built on top of the Fairspec standard and Polars DataFrames

328 1 1

fairspec-library

Fairspec TypeScript is a fast data management framework built on top of the Fairspec standard and Polars DataFrames

313 1 1

fairspec-dataset

Fairspec TypeScript is a fast data management framework built on top of the Fairspec standard and Polars DataFrames

311 1 1