PyRank

Wdl Workflow Python Packages

Python packages with the GitHub topic wdl-workflow. Sorted by monthly downloads, with stars and forks.
stjude-rust-labs
sprocket-bio

A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).

10K 218 80
4dn-dcic
tibanna

Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integration Center) to process data. Tibanna supports CWL/WDL (w/ docker), Snakemake (w/ conda) and custom Docker/shell command.

4K 73 29
stjudecloud
wdldoc

Create WDL documentation using Markdown.

222 29 5
stjude-rust-labs
sprocket-py

A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).

57 218 80
common-workflow-language
wdl2cwl

[Experimental] Workflow Definition Language (WDL) to CWL

57 28 4