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Viruses Python Packages

Python packages with the GitHub topic viruses. Sorted by relevance, with stars and monthly downloads.
prophyle
prophyle

Accurate, resource-frugal and deterministic DNA sequence classifier.

1K 36 5
luquelab
pycapsid

A set of computational tools written in python for the analysis of viral capsids

1K 10 1
tiszalab
scampiman

pipeline to align and summarize tiled amplicon coverage from raw sequences

615 3 0
refresh-bio
vclust

Fast and accurate tool for calculating Average Nucleotide Identity (ANI) and clustering virus genomes and metagenomes

320 108 4
gabrielvpina
viralquest

A bioinformatics tool for viral genome analysis and characterization.

230 13 1
pgcbioinfo
vargram

A Python visualization tool for genomic surveillance

151 0 0
ncrna
pathogentrack

A pipeline to identify pathogenic microorganisms from scRNA-seq raw data.

134 31 8
xiaosheep01
hiscan

Scanning histone mimics in secquences

99 0 0
faylward
viralrecall

Detection of NCLDV signatures in 'omic data

73 35 12
Vini2
reneo

Unraveling Viral Genomes from Metagenomes

36 11 2
    • Data from PyPI, GitHub, ClickHouse, and BigQuery