Vcf Files Python Packages

vobject

A full-featured Python package for parsing and creating iCalendar and vCard files

snpio

API to read, write, and filter DNA sequence alignment files

vcfstats

Powerful statistics for VCF files

haplodynamics

A python library to develop genomic data simulators

svforge

🛠️ Reproducible, traceable synthetic SV VCFs for testing what your pipeline does to them. Caller-shaped Manta and DELLY outputs, real gnomAD/ENCODE injection with self-verifying tags. Synthetic data only.

vcfy

Generate VCF file with random variants from reference genome

tbvcfreport

Parses SnpEff generated VCF and generates an HTML report.