Variation Python Packages

bioutils

provides common tools and lookup tables used primarily by the hgvs and uta packages

biocommons-seqrepo

non-redundant, compressed, journalled, file-based storage for biological sequences

hgvs

Python library to parse, format, validate, normalize, and map sequence variants according to HGVS Nomenclature (https://hgvs-nomenclature.org/).

robovast

Robotics Variation Automation and Scalable Testing

robovast-client

Robotics Variation Automation and Scalable Testing

robovast-nav

Robotics Variation Automation and Scalable Testing

robovast-sim-roqsim

Robotics Variation Automation and Scalable Testing

robovast-cluster

Robotics Variation Automation and Scalable Testing

seqrepo

non-redundant, compressed, journalled, file-based storage for biological sequences

msda

Library for multi-dimensional, multi-sensor, uni/multivariate time series data analysis, unsupervised feature selection, unsupervised deep anomaly detection, and prototype of explainable AI for anomaly detector

biocommons-anyvar

Lightweight, portable variation registration and retrieval

anyvar

Lightweight, portable variation registration and retrieval

seqrepo-rest-service

OpenAPI-based REST interface to biological sequences and sequence metadata