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Tree Sequences Python Packages

Python packages with the GitHub topic tree-sequences. Sorted by monthly downloads, with stars and forks.
tskit-dev
tskit

Population-scale Ancestral Recombination Graph (ARG) library

33K 191 84
molpopgen
fwdpy11

Forward-time simulation in Python using fwdpp

9K 34 6
Sendrowski
ancestree-popgen

Unified likelihood inference of ancestral alleles under supplied or inferred genealogies.

921 1 0
tskit-dev
tstrait

Quantitative trait simulation for ARGs

573 9 7
tskit-dev
idm-tskit

Population-scale Ancestral Recombination Graph (ARG) library

57 191 84
    • Original data from PyPI, GitHub, and OSV; downloads served through ClickHouse
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