transition-states
Restricted-Step Image Rational Function Optimisation (RS-I-RFO) implemented as a drop-in ase.optimize subclass.
pdb2reaction - Automated enzyme reaction path elucidation from PDB structures
Python suite for optimization of stationary points on ground- and excited states PES and determination of reaction paths.
Machine‑Learning / Molecular‑Mechanics (ML/MM) hybrid calculator and CLI toolset for Mechanistic Investigation of Enzymatic Reactions.
