Terminology Python Packages

pathling

Tools that make it easier to use FHIR and clinical terminology within data analytics, built on Apache Spark.

19K 126 23

bio2bel-hgnc

A package for converting HGNC to BEL

1K 2 0

bio2bel-chebi

A package for converting ChEBI to BEL

804 1 0

bio2bel-entrez

A package for parsing and storing Entrez Gene

763 0 0

medialpy

A small python package that allows the user to look up common medical abbreviations.

706 13 2

bio2bel-drugbank

A Bio2BEL package for DrugBank (https://www.drugbank.ca)

336 10 5

jate

JATE - Just Automatic Term Extraction (in Python)

238 85 29

bio2bel-uniprot

UniProt Knowledge Base to BEL

218 0 1

bio2bel-go

A Bio2BEL package for converting the Gene Ontology (GO) to BEL

146 1 0

bio2bel-mesh

A Bio2BEL package for the Medical Subject Headings (MeSH; https://meshb.nlm.nih.gov)

140 4 1

bio2bel-famplex

Convert FamPlex to BEL

128 0 0

bio2bel-pfam

A Bio2BEL package for PFAM (https://pfam.xfam.org/)

123 0 0