PyRank

Taxonomic Classifications Python Packages

Python packages with the GitHub topic taxonomic-classifications. Sorted by relevance, with stars and monthly downloads.
taxprofiler
taxpasta

TAXnomic Profile Aggregation and STAndardisation

594 44 8
pnnl
pnnl-atlas

ATLAS - Three commands to start analyzing your metagenome data

245 405 98
metagenome-atlas
metagenome-atlas

ATLAS - Three commands to start analyzing your metagenome data

198 405 98
FOI-Bioinformatics
flextaxd

FlexTaxD (Flexible Taxonomy Databases) - Create, add, merge different taxonomy sources (QIIME, GTDB, NCBI and more) and create metagenomic databases (kraken2, ganon and more )

89 67 8