PyRank

Taxonomic Classifications Python Packages

Python packages with the GitHub topic taxonomic-classifications. Sorted by monthly downloads, with stars and forks.
taxprofiler
taxpasta

TAXnomic Profile Aggregation and STAndardisation

340 43 8
pnnl
pnnl-atlas

ATLAS - Three commands to start analyzing your metagenome data

205 405 95
metagenome-atlas
metagenome-atlas

ATLAS - Three commands to start analyzing your metagenome data

83 405 95
FOI-Bioinformatics
flextaxd

FlexTaxD (Flexible Taxonomy Databases) - Create, add, merge different taxonomy sources (QIIME, GTDB, NCBI and more) and create metagenomic databases (kraken2, ganon and more )

47 68 8