PyRank

System Biology Python Packages

Python packages with the GitHub topic system-biology. Sorted by relevance, with stars and monthly downloads.
compath
compath-utils

A repository containing abstract classes that Bio2BEL repos should extend to be adapted to the Compath environment

877 0 0
bio2bel
bio2bel-reactome

Integration of pathway-related information from Reactome in BEL

830 5 1
glucksfall
atlas-rbm

Automatic rule-based modeling of metabolism, protein-protein interactions, and regulation of gene expression

471 0 1
althonos
moclo

Modular cloning simulation with the MoClo framework in Python

412 11 2
compath
compath-resources

This repository contains the different resources derived or generated using ComPath

362 9 1
glucksfall
pleione

Calibration of Rule-Based Models

255 1 2
althonos
moclo-ecoflex

Modular cloning simulation with the MoClo framework in Python

247 11 2
althonos
moclo-ytk

Modular cloning simulation with the MoClo framework in Python

235 11 2
althonos
moclo-cidar

Modular cloning simulation with the MoClo framework in Python

235 11 2