PyRank
  • Search
  • PyPI
  • GitHub
  • Insights
  • Compare
  • Advisories
  • Ecosystem
  • About

System Biology Python Packages

Python packages with the GitHub topic system-biology. Sorted by monthly downloads, with stars and forks.
bio2bel
bio2bel-reactome

Integration of pathway-related information from Reactome in BEL

1K 5 1
compath
compath-utils

A repository containing abstract classes that Bio2BEL repos should extend to be adapted to the Compath environment

477 0 0
compath
compath-resources

This repository contains the different resources derived or generated using ComPath

340 9 1
althonos
moclo

Modular cloning simulation with the MoClo framework in Python

306 11 2
glucksfall
atlas-rbm

Automatic rule-based modeling of metabolism, protein-protein interactions, and regulation of gene expression

257 0 1
glucksfall
pleione

Calibration of Rule-Based Models

175 1 2
althonos
moclo-ytk

Modular cloning simulation with the MoClo framework in Python

151 11 2
althonos
moclo-ecoflex

Modular cloning simulation with the MoClo framework in Python

125 11 2
althonos
moclo-cidar

Modular cloning simulation with the MoClo framework in Python

120 11 2
    • Original data from PyPI, GitHub, and OSV; downloads served through ClickHouse
    • Sources & methodology