Summary Statistics Python Packages

pysumstats

Python package for reading, combining, meta-analyzing, and saving GWAS summary statistics data.

pysummaries

Generate beautiful summary tables from pandas, polars or pyarrow dataframes

data-morph-ai

Morph an input dataset of 2D points into select shapes, while preserving the summary statistics to a given number of decimal points through simulated annealing. It is intended to be used as a teaching tool to illustrate the importance of data visualization.

pygwasvcf

A package for reading GWAS summary statistics stored in VCF/BCF format