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Structural Variants Python Packages

Python packages with the GitHub topic structural-variants. Sorted by monthly downloads, with stars and forks.
ylab-hi
octopusv

Merge and compare structural variants across callers, samples, and platforms. Standardizes BND-heavy output from GRIDSS, SvABA, Sniffles, and more.

2K 51 3
pieetie
svforge

🛠️ Reproducible, traceable synthetic SV VCFs for testing what your pipeline does to them. Caller-shaped Manta and DELLY outputs, real gnomAD/ENCODE injection with self-verifying tags. Synthetic data only.

106 1 0
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