Structural Mri Python Packages

smriprep

Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)

corticalfields

Spectral cortical and subcortical analysis with statistical testing (RSA, CCA, PLS, PERMANOVA, TFCE, NBS, laterality classification), on meshes and point clouds — Laplace-Beltrami decomposition, atlas-free asymmetry, GPU-accelerated optimal transport, hippocampal subfield analysis (HippUnfold), ShapeDNA/BrainPrint spectral fingerprinting, geometric deep learning, Bayesian inference, and normative modeling for structural neuroimaging.

smriprep-docker

Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)

graynet

Subject-wise networks from structural MRI, both vertex- and voxel-wise features (thickness, GM density, curvature, gyrification)