PyRank

Stochastic Simulation Algorithm Python Packages

Python packages with the GitHub topic stochastic-simulation-algorithm. Sorted by relevance, with stars and monthly downloads.
crflynn
stochastic

Generate realizations of stochastic processes in python.

43K 509 90
SystemsBioinformatics
stochpy

StochPy is a versatile stochastic modeling package which is designed for stochastic simulation of molecular control networks

2K 44 11
biocircuits
bioscrape

BioSCRAPE (Bio-circuit Stochastic Single-cell Reaction Analysis and Parameter Estimation)

856 30 19
biosimulators
biosimulators-gillespy2

GillesPy2 biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container

846 2 1
alexplaka
abstochkin

Agent-based Stochastic Kinetics

747 1 0
biosimulators
biosimulators-bionetgen

BioNetGen biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container

696 1 2
DiODeProject
mumot

Multiscale Modelling Tool - mathematical modelling without the maths

243 24 5
wcota
dynsis

Python wrapper for dynSIS Fortran simulations

223 12 2
Jamesflynn1
pyrbm

A Python framework to build and simulate stochastic rules-based models

155 3 0