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Statistical Genetics Python Packages

Python packages with the GitHub topic statistical-genetics. Sorted by relevance, with stars and monthly downloads.
sgkit-dev
sgkit

Scalable genetics toolkit

5K 278 40
mancusolab
genoio

Minimalist API for parsing genotype files into Numpy data structures, backed by Rust.

3K 10 0
JianYang-Lab
gsmap

Integrating GWAS and spatial transcriptomics for spatially resolved mapping of cells associated with human complex traits.

909 214 17
cafferychen777
edgemap

Python package for partitioning GWAS heritability into cell-intrinsic (node) and cell-cell communication (edge) components from spatial transcriptomics.

636 2 0
LeonSong1995
gps-mapping

Integrating GWAS and spatial transcriptomics for spatially resolved mapping of cells associated with human complex traits.

590 214 17
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