PyRank

Spot Detection Python Packages

Python packages with the GitHub topic spot-detection. Sorted by monthly downloads, with stars and forks.
fish-quant
big-fish

Toolbox for the analysis of smFISH images.

2K 79 26
gletort
fishfeats

Napari plugin for spatial RNA quantification

2K 6 2
vanvalenlab
deepcell-spots

Deep Learning Library for Spot Detection

280 24 5
BBQuercus
deepblink

Threshold independent detection and localization of diffraction-limited spots.

210 39 9
fish-quant
big-fish-reloaded

Toolbox for the analysis of smFISH images.

170 79 26
arnaublanco
fluospotter

Fluospotter is an end-to-end pipeline designed for nuclei segmentation and puncta detection in fluorescence microscopy images.

82 3 0