splicing
A python package and a set of shell commands to handle GTF files
Tissue-specific variant effect predictions on splicing
✂️ Deep learning-based splice site predictor that improves spliced alignments
Implementation of SpliceAI, Illumina's deep neural network to predict variant effects on splicing, in PyTorch.
SPLICE-q -- A Python tool for genome-wide SPLIcing Efficiency quantification from RNA-seq data.
regulAS: Bioinformatics Toolset for ML-assisted Integrative Analysis of Alternative Splicing Regulome using RNA-Seq data
