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Spatial Biology Python Packages

Python packages with the GitHub topic spatial-biology. Sorted by monthly downloads, with stars and forks.
quadbio
cellmapper

k-NN-based mapping of cells across representations to transfer labels, embeddings, and expression values.

1K 17 4
ratschlab
aestetik

AESTETIK: Convolutional autoencoder for learning spot representations from spatial transcriptomics and morphology data

215 28 4
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    • Sources & methodology