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Sparse Matrix Python Packages

Python packages with the GitHub topic sparse-matrix. Sorted by monthly downloads, with stars and forks.
pydata
sparse

Sparse multi-dimensional arrays for the PyData ecosystem

1.1M 669 147
ing-bank
sparse-dot-topn

Python package to accelerate the sparse matrix multiplication and top-n similarity selection

266K 425 85
pyamg
pyamg

Algebraic Multigrid Solvers in Python

177K 658 125
python-graphblas
python-graphblas

Python library for GraphBLAS: high-performance sparse linear algebra for scalable graph analytics

18K 158 16
milanofthe
rslab

Pure-Rust sparse direct solver (symmetric LDLᵀ + unsymmetric LU + KLU) and preconditioner. A PARDISO-style, type-agnostic, embeddable replacement with no native dependencies.

8K 13 1
flatironinstitute
sparse-dot-mkl

Python wrapper for Intel Math Kernel Library (MKL) matrix multiplication

6K 94 11
alugowski
fast-matrix-market

Fast and full-featured Matrix Market I/O library for C++, Python, and R

6K 91 11
chaobrain
brainevent

Event-driven Computation for Brain Dynamics.

3K 7 3
coady
spector

Sparse vectors.

2K 6 0
mbdriscoll
indigo

High-Performance Structured Linear Operators

2K 13 2
erivlis
algebrax

Algebraic Primitives for Sparse Data Structures in Python

1K 7 0
walkerchi
torch-sla

torch sparse linear algebra library

970 56 2
lenskit
csr

Compressed sparse matrices

956 15 2
metagraph-dev
grblas

Python library for GraphBLAS: high-performance sparse linear algebra for scalable graph analytics

814 158 16
cai4cai
torchsparsegradutils

A collection of utility functions to work with PyTorch sparse tensors

806 41 4
alugowski
matrepr

Format matrices and tensors to HTML, string, and LaTeX, with Jupyter integration.

776 16 0
caelyreth
mlx-lattice

Sparse convolution library for MLX designed for point cloud operation.

772 8 0
AlgOptGroup
apxchol

Parallel approximate-Cholesky preconditioner and PCG solver for graph-Laplacian and SDDM linear systems (C++23, OpenMP/CUDA, Python bindings)

615 8 3
QuentinWach
micromode

An FDFD electromagnetic mode solver for rasterized waveguide cross sections made to be a standard plugin for FDTD engines.

576 8 0
open2c
coolpuppy

A versatile tool to perform pile-up analysis on Hi-C data in .cool format.

486 82 12
tariqshihadah
linref

A Python library built on pandas and geopandas for linearly referenced data management, engineering, and analysis using the DataFrame accessor pattern (.lr).

401 11 5
michelemartone
pyrsb

PyRSB: a Python interface to the librsb Sparse Matrix library

392 20 4
glami
sansa

SANSA - sparse EASE for millions of items

385 46 8
nschloe
betterspy

:eyes: Visualization for SciPy sparse matrices.

282 42 7
    • Original data from PyPI, GitHub, and OSV; downloads served through ClickHouse
    • Sources & methodology