Snv Python Packages

vacspin

Group-IV colour-centre spin-photon interfaces: strained spin Hamiltonians, cyclicity, transition-resolved Purcell budgets and exact single-shot readout statistics

scsim

Simulator of SNVs and CNAs in single-cell DNA sequencing

granite-suite

A collection of software to work with genomic variants

branchsnv

Dependency-free identification of branch-associated SNVs from rooted phylogenies and transposed NEXUS matrices.

plink-bed-reader

Lightweight and memory efficient reader for PLINK BED files. It supports both SNP-major and individual-major formats. Written in Python.

mtbparser

A simple module for diagnostic variant information parsing