PyRank

Snp Python Packages

Python packages with the GitHub topic snp. Sorted by monthly downloads, with stars and forks.
ncbi
icn3dpy

web-based protein structure viewer and analysis tool interactively or in batch mode

5K 177 53
ou6326
pygapit-ng

Python implementation of GAPIT 3.5 for GWAS and genomic prediction, with disk-backed NumPy, HDF5, and Zarr workflows.

2K 0 0
paulmaier
fasta2genotype

Convert STACKS fasta to many genotype formats

389 6 3
suryakantamangaraj
touchstone-parser

Python library for parsing Touchstone .sNp files in RF/microwave engineering. Provides easy APIs for S‑parameter analysis, integration with NumPy/SciPy, and reproducible workflows for simulation and visualization.

216 1 0
mkpython3
mutation-simulator

A tool for simulating random mutations in any genome

211 43 6
gtonkinhill
pairsnp

A set of scripts for calculating pairwise SNP distance

140 45 7
USDA-VS
vsnpdev

vSNP -- validate SNPs

107 22 12
CNAG-Biomedical-Informatics
beacon2-cbi-tools

Beacon v2 - CNAG Biomedical Informatics - Tools (Data ingestion tools)

104 3 0
benguscott
snp-genomic-report

Turn raw consumer DNA data (FTDNA, AncestryDNA, 23andMe, MyHeritage) into a research/educational genomic PDF report — 413 annotated SNPs across 33 domains. Not medical advice.

60 0 0