Singularity Python Packages

spython

streamlined singularity python client (spython) for singularity

1.3M 67 31

plip

Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Schake, Bolz, et al. (2025), https://doi.org/10.1093/nar/gkaf361

15K 722 144

scitex-container

Unified container management for Apptainer and Docker

14K 0 0

hpccm

HPC Container Maker

11K 519 107

scitex-agent-container

Declarative YAML framework to define, run & orchestrate AI coding agents

5K 0 0

expfactory

software to generate a reproducible container with a battery of experiments

2K 39 15

singularity-hpc

Local filesystem registry for containers (intended for HPC) using Lmod or Environment Modules. Works for users and admins.

1K 134 31

popper

Container-native task automation engine.

987 311 61

clowdr

Command-line utility for iteratively developing pipelines, deploying them at scale, and sharing data and derivatives

939 10 3

singularity-compose

orchestration for singularity containers (under development)

638 80 17

pycompss

COMP Superscalar (COMPSs) is a framework which aims to ease the development and execution of applications for distributed infrastructures, such as Clusters, Grids and Clouds.

607 65 24

composite-resolve

Evaluate Python functions at points where they're undefined.

318 6 0

brainseg-containers

A container based wrapper for brain segmentation tools

223 1 0

connectomemapper

Connectome Mapper 3 is a BIDS App that implements full anatomical, diffusion, resting/state functional MRI, and recently EEG processing pipelines, from raw T1 / DWI / BOLD , and preprocessed EEG data to multi-resolution brain parcellation with corresponding connection matrices.

192 87 31