PyRank

Singlecell Python Packages

Python packages with the GitHub topic singlecell. Sorted by monthly downloads, with stars and forks.
openbraininstitute
bluepyemodel

Blue Brain Python Electrical Modeling Pipeline

6K 2 1
JinmiaoChenLab
discotoolkit

Python version of DISCO toolkit

2K 13 1
biolab
orange3-singlecell

🍊🔬 Orange add-on for gene expression of single cell data

1K 17 25
aristoteleo
pantheon-agents

A general, evolvable, and distributed agent framework & harness for data science.

1K 488 67
Arshammik
scsplice

Single-cell alternative-splicing analysis

592 19 0
biolab
bluewhale3-singlecell

🍊🔬 Orange add-on for gene expression of single cell data

346 17 25
biolab
orange3-variants

🍊🔬 Orange add-on for gene expression of single cell data

142 17 25
biolab
blauwal3-singlecell

🍊🔬 Orange add-on for gene expression of single cell data

116 17 25
northstaratlas
northstar

Single cell type annotation guided by cell atlases, with freedom to be queer

101 25 6