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Single Cell Rna Sequencing Python Packages

Python packages with the GitHub topic single-cell-rna-sequencing. Sorted by monthly downloads, with stars and forks.
thonzyk
scunveil

Pretrained scRNA-seq toolkit for generating cell embeddings and depth-enriched gene expression directly from raw UMI counts.

451 1 0
OmicsML
pydance

DANCE: a deep learning library and benchmark platform for single-cell analysis

195 388 37
    • Original data from PyPI, GitHub, and OSV; downloads served through ClickHouse
    • Sources & methodology