Simpleitk Python Packages

simpleitk

SimpleITK: a layer built on top of the Insight Toolkit (ITK), intended to simplify and facilitate ITK's use in rapid prototyping, education and interpreted languages.

medpy

Medical image processing in Python

simpleitk-simpleelastix

SimpleITK: a layer built on top of the Insight Toolkit (ITK), intended to simplify and facilitate ITK's use in rapid prototyping, education and interpreted languages.

mikan-rs

A medical image kit for segmentation metrics evaluation

zenreg

ZenReg is a Python-based high-throughput, memory-efficient pipeline for N-dimensional image registration, designed for large microscopy and imaging datasets.

labelfusion

Implementation of various label fusion approaches for medical imaging.

bruker

A modular toolkit for Bruker MRI raw-data handling.

sitk-cli

Wrap SimpleITK functions as command lines

imagepy

Image process framework based on plugin like imagej, it is esay to glue with scipy.ndimage, scikit-image, opencv, simpleitk, mayavi...and any libraries based on numpy

grand-challenge-metrics

evalutils helps users create extensions for grand-challenge.org

n4ax

JAX/GPU N4 bias field correction — a fast drop-in match for SimpleITK N4 (~2600x faster on A100, <0.2% match)

dicom2stl

Python script to extract a STL surface from a DICOM image series.