PyRank

Sequence Design Python Packages

Python packages with the GitHub topic sequence-design. Sorted by relevance, with stars and monthly downloads.
Edinburgh-Genome-Foundry
dnachisel

:pencil2: A versatile DNA sequence optimizer

120K 274 52
Edinburgh-Genome-Foundry
snapgene-reader

👓 Python library to parse Snapgene *.dna files to dict or biopython seqrecord.

23K 31 8
Edinburgh-Genome-Foundry
genedom

Batch domestication of genetic parts with Python

475 16 1
INFN-MRI
pulserver

A PyPulseq-based client/server MR sequence design toolbox.

367 6 0
Edinburgh-Genome-Foundry
caravagene

Plot multi-part genetic constructs.

360 26 2
Edinburgh-Genome-Foundry
goldenhinges

DNA overhang design for Golden Gate etc.

338 15 0
Edinburgh-Genome-Foundry
zymp

:scissors: Design compact restriction sites arrays (python utility)

160 10 0
Edinburgh-Genome-Foundry
kappagate

:crystal_ball: Predict DNA assembly clone validity rates - powered by Kappa

153 10 0
INFN-MRI
pulseclient

A Python client for communication between Pulseq interpreter and Pulseq design server.

97 2 0