PyRank

Sequence Design Python Packages

Python packages with the GitHub topic sequence-design. Sorted by monthly downloads, with stars and forks.
Edinburgh-Genome-Foundry
dnachisel

:pencil2: A versatile DNA sequence optimizer

34K 282 53
Edinburgh-Genome-Foundry
snapgene-reader

👓 Python library to parse Snapgene *.dna files to dict or biopython seqrecord.

24K 31 8
e-south
motif-balance

Design DNA sequences that balance supplied motif models.

2K 0 0
pulserver
pulserver

A PyPulseq-based client/server MR sequence design toolbox.

1K 6 0
Edinburgh-Genome-Foundry
goldenhinges

:link: Short overhangs design for DNA assembly

320 15 0
Edinburgh-Genome-Foundry
genedom

Batch domestication of genetic parts with Python

265 16 1
Edinburgh-Genome-Foundry
caravagene

🎨 Python library to plot multi-part genetic constructs

263 27 2
Edinburgh-Genome-Foundry
zymp

:scissors: Design compact restriction sites arrays (python utility)

99 10 0
Edinburgh-Genome-Foundry
kappagate

:crystal_ball: Predict DNA assembly clone validity rates - powered by Kappa

80 10 0
INFN-MRI
pulseclient

A Python client for communication between Pulseq interpreter and Pulseq design server.

48 2 0