Sequence Design Python Packages

dnachisel

:pencil2: A versatile DNA sequence optimizer

snapgene-reader

👓 Python library to parse Snapgene *.dna files to dict or biopython seqrecord.

caravagene

Plot multi-part genetic constructs.

genedom

Batch domestication of genetic parts with Python

pulserver

A PyPulseq-based client/server MR sequence design toolbox.

goldenhinges

:link: Short overhangs design for DNA assembly

zymp

:scissors: Design compact restriction sites arrays (python utility)

pulseclient

A Python client for communication between Pulseq interpreter and Pulseq design server.

kappagate

:crystal_ball: Predict DNA assembly clone validity rates - powered by Kappa