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Scrnaseq Python Packages

Python packages with the GitHub topic scrnaseq. Sorted by monthly downloads, with stars and forks.
zamushwani
biomedical-ai-skills

AI agent skills for cancer biology and multi-omics research

2K 1 2
LouisFaure
scfates

a scalable python suite for tree inference and advanced pseudotime analysis from scRNAseq data.

2K 73 6
davisidarta
topometry

Systematically learn and evaluate the latent geometry of high-dimensional data, with a focus on scRNAseq analysis

1K 109 6
bodegalab
irescue

Uncertainty-aware quantification of Transposable Elements expression in scRNA-seq at locus- or subfamily-level

684 26 4
arogozhnikov
demuxalot

Reliable, scalable, efficient demultiplexing for single-cell RNA sequencing

145 27 3
rahulbhadani
scomix

Single-Cell Data Science

23 0 0
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