Scientific Publications Python Packages

lovelyplots

Matplotlib style sheets to nicely format figures for scientific papers, thesis and presentations while keeping them fully editable in Adobe Illustrator.

matisse-py

Markdown To Impressive Scientific Slides

doconce

Markup language similar to Markdown targeting scientific reports, software documentation, books, blog posts, and slides. DocOnce can generate LaTeX, Sphinx, HTML, IPython notebooks, Markdown, MediaWiki, and other formats

stepup-reprep

StepUp RepRep is the StepUp extension for Reproducible Reporting

cnsplots

A comprehensive plotting library for bioinformatics and data visualization

labmate

This library facilitates the clear division of data acquisition from analysis. It provides robust tools for efficient data management and includes features to ensure a further use of the saved data.

pubmed2pdf

A Python package to download full article PDFs from OA publications

django-publications-bootstrap

A Django app for managing scientific publications with a Bootstrap-powered UI.

bibquery

Creates BibTeX entries from links using BibItNow (https://github.com/Langenscheiss/bibitnow), Google Scholar and Selenium.

scirate

Python wrapper for extracting content from Scirate.

extensysplots

Matplotlib Extensys style format for scientific publications

stripnet

STriP Net: Semantic Similarity of Scientific Papers (S3P) Network

lisc

Literature Scanner

physics-plot

Publication-quality Matplotlib styling and helper utilities for scientific plots

pys2

PyS2 is a python wrapper for the Semantic Scholar (S2) API

autograph-obsidian

Automatic knowledge graph generation for Obsidian.md

priceprop

Calibrate and simulate linear propagator models for the price impact of an extrinsic order flow.

example-aless80

Lightweight markup language - Document Once

pycerpt

A cli utility for generating excerpts from highlighted PDFs