Science Education Python Packages

diff-biophys

Differentiable biophysical modeling in JAX (SAXS, NMR, CD), with Jupyter Notebook examples.

synth-nmr

NMR spectroscopy calculations for protein structures. Jupyter Notebook tutorials are available to visualize the concepts.

teslasynth

MIDI synthesizer that plays music through any interrupted device, including Tesla coils, Flyback transformers, High power lasers, ...

synth-pdb

Generate realistic PDB files with mixed secondary structures for testing, education and bioinformatics tool development. Jupyter Notebook tutorials are available to visualize the concepts..

synth-dynamics

Fast Langevin dynamics engine using the Anisotropic Network Model (ANM) for rapid protein conformational ensemble generation.

orbital-play

Interactive 3D molecular orbital visualization and real-time quantum chemistry solver for education.