Rpy2 Python Packages

anndata2ri

Convert between AnnData and SingleCellExperiment

rpy2-arrow

Share Apache Arrow datasets between Python and R.

pychattr

Python Channel Attribution (pychattr) - A Python implementation of the excellent R ChannelAttribution library

rpy-bridge

Python-R interoperability layer for environment management, type-safe conversions, data normalization, safe function execution, and supporting recursive R object unpacking.

pyllmr

python interface to r via spec files and rpy2 for function calling from cli/python: search/install/plan/exec

mclustpy

Python wrapper for R's Mclust algorithm: Gaussian model-based clustering with automatic model selection via BIC

azimuthpy

Python wrapper for Azimuth (Seurat-based single-cell mapping) using rpy2

profile-binr

PROFILE methodology for the binarisation and normalisation of RNA-seq data

rpy2-r6

Mapping the R package R6

pyreqtl

A collection of Python modules equivalent to R ReQTL Toolkit aims to identify the association between expressed SNVs with their gene expression using RNA-sequencing data.