Rpy2 Python Packages

anndata2ri

Convert between AnnData and SingleCellExperiment

2K 154 19

pychattr

Python Channel Attribution (pychattr) - A Python implementation of the excellent R ChannelAttribution library

1K 59 22

rpy2-arrow

Share Apache Arrow datasets between Python and R.

834 19 4

rpy2-r6

rpy2 extension package to faciliate handling of R6 objects

366 3 1

rpy-bridge

Python-R interoperability layer for environment management, type-safe conversions, data normalization, safe function execution, and supporting recursive R object unpacking.

318 4 0

mclustpy

Python wrapper for R's Mclust algorithm: Gaussian model-based clustering with automatic model selection via BIC

135 9 1

azimuthpy

Python wrapper for Azimuth single-cell reference mapping: annotate cell types from AnnData using rpy2

111 2 0

profile-binr

PROFILE RNA-seq binarization technique.

105 3 1

pyreqtl

A collection of Python modules equivalent to R ReQTL Toolkit aims to identify the association between expressed SNVs with their gene expression using RNA-sequencing data.

43 11 0