Rna Velocity Python Packages

cellrank

CellRank: dynamics from multi-view single-cell data

dynamo-release

Inclusive model of expression dynamics with conventional or metabolic labeling based scRNA-seq / multiomics, vector field reconstruction and differential geometry analyses

scvelo-rs

Drop-in Rust + PyO3 acceleration of scvelo for single-cell RNA velocity

cytopath

Simulation based inference of differentiation trajectories from RNA velocity fields.

celldancer

Study RNA velocity through neural network.

dynast-release

Inclusive and efficient quantification of labeling and splicing RNAs for time-resolved metabolic labeling based scRNA-seq experiments

velodyn

Dynamical systems approaches for RNA velocity analysis

test-20230321-sl-243

Predict RNA velocity through deep learning