Rna Seq Analysis Python Packages

rnalysis

RNAlysis is an analysis software for RNA sequencing data. RNAlysis can help to filter, visualize, explore, analyze, and share your data.

scarches

Reference mapping for single-cell genomics

eastr

Emending Alignment of Spliced Transcript Reads

celldb

Functional genomics database python client.

ciara-python

"Cluster Independent Algorithm for the identification of RAre cell types."

polyase

A package for analyzing allele-specific expression in polyploid organisms

single-cell-portal

Convenience scripts for Single Cell Portal

profile-binr

PROFILE methodology for the binarisation and normalisation of RNA-seq data

pyreqtl

A collection of Python modules equivalent to R ReQTL Toolkit aims to identify the association between expressed SNVs with their gene expression using RNA-sequencing data.